Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm44855-201ENSMUST00000205725 362 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhga11Q91XY8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm15678-201ENSMUST00000117573 960 ntBASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm9522-201ENSMUST00000182394 926 ntBASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm24447-201ENSMUST00000083977 338 ntBASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhga11Q91XY8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gm7488-201ENSMUST00000117148 684 ntBASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhga11Q91XY8 Gm21854-201ENSMUST00000179901 471 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms