Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Gm2756-201ENSMUST00000195851 400 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm45612-201ENSMUST00000211320 160 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rpa1Q8VEE4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms