Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.01□□□□□ -0.49
Swsap1Q8VCI7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm43438-201ENSMUST00000198133 379 ntBASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12□□□□□ -0.49
Swsap1Q8VCI7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm19078-201ENSMUST00000206311 727 ntBASIC12□□□□□ -0.49
Swsap1Q8VCI7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12□□□□□ -0.49
Swsap1Q8VCI7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Swsap1Q8VCI7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms