Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
H2afjQ8R1M2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afjQ8R1M2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Gm27321-201ENSMUST00000185021 205 ntBASIC12.32□□□□□ -0.44
H2afjQ8R1M2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afjQ8R1M2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm43703-201ENSMUST00000200523 763 ntBASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.31□□□□□ -0.44
H2afjQ8R1M2 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afjQ8R1M2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms