Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm2810-201ENSMUST00000118681 990 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm44492-201ENSMUST00000197012 141 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 AW822252-206ENSMUST00000208904 237 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf4Q8K4J2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Gm12350-201ENSMUST00000121208 462 ntBASIC12.03□□□□□ -0.48
Ebf4Q8K4J2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms