Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm21814-202ENSMUST00000203277 873 ntBASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm45098-201ENSMUST00000207179 657 ntBASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist3h2bbQ8CGP0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm44608-201ENSMUST00000206827 855 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist3h2bbQ8CGP0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms