Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smc2Q8CG48 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc2Q8CG48 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc2Q8CG48 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc2Q8CG48 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc2Q8CG48 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm7730-201ENSMUST00000212486 454 ntBASIC15.19■□□□□ 0.02
Smc2Q8CG48 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.19■□□□□ 0.02
Smc2Q8CG48 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc2Q8CG48 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.18■□□□□ 0.02
Smc2Q8CG48 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Gm38223-201ENSMUST00000194484 695 ntBASIC15.18■□□□□ 0.02
Smc2Q8CG48 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Syt7-205ENSMUST00000224135 1557 ntBASIC15.18■□□□□ 0.02
Smc2Q8CG48 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc2Q8CG48 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm15371-201ENSMUST00000117057 784 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.17■□□□□ 0.02
Smc2Q8CG48 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc2Q8CG48 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms