Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc87Q8CDL9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc87Q8CDL9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm15393-201ENSMUST00000120499 219 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm16215-201ENSMUST00000161990 637 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm7730-201ENSMUST00000212486 454 ntBASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc87Q8CDL9 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Gm4804-201ENSMUST00000182234 999 ntBASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Mir7221-201ENSMUST00000184009 72 ntBASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc87Q8CDL9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm29667-201ENSMUST00000190817 490 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm44855-201ENSMUST00000205725 362 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm20445-201ENSMUST00000061905 565 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms