Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm8805-201ENSMUST00000117848 313 ntBASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm1335-201ENSMUST00000121653 386 ntBASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm13123-201ENSMUST00000122173 492 ntBASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gm9899-201ENSMUST00000065519 555 ntBASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf31Q8CCF0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm8062-201ENSMUST00000139696 444 ntBASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm27682-201ENSMUST00000183930 110 ntBASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm10146-201ENSMUST00000072739 309 ntBASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf31Q8CCF0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Gm23931-201ENSMUST00000103842 109 ntBASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf31Q8CCF0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms