Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm7287-201ENSMUST00000205267 602 ntBASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm19078-201ENSMUST00000206311 727 ntBASIC15.42■□□□□ 0.06
Vps53Q8CCB4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps53Q8CCB4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm12928-201ENSMUST00000117115 573 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm13392-201ENSMUST00000117708 150 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm11524-201ENSMUST00000119349 807 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm17420-201ENSMUST00000164753 153 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm27847-201ENSMUST00000183711 107 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm27375-201ENSMUST00000183799 107 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm43094-201ENSMUST00000196549 921 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm10478-201ENSMUST00000084451 396 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps53Q8CCB4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Gm8062-201ENSMUST00000139696 444 ntBASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.4■□□□□ 0.06
Vps53Q8CCB4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms