Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lysmd4Q8CC84 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm11594-201ENSMUST00000122313 162 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm7774-201ENSMUST00000200064 533 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm46209-201ENSMUST00000217912 553 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lysmd4Q8CC84 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm8410-201ENSMUST00000117225 605 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.87□□□□□ -0.51
Lysmd4Q8CC84 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms