Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa4Q8CA71 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa4Q8CA71 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.33■□□□□ 0.04
Shisa4Q8CA71 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm6222-202ENSMUST00000182143 629 ntBASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm38241-201ENSMUST00000192641 898 ntBASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Gm19931-201ENSMUST00000198920 368 ntBASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa4Q8CA71 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.32■□□□□ 0.04
Shisa4Q8CA71 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm15236-201ENSMUST00000117309 379 ntBASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm6458-201ENSMUST00000211573 635 ntBASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa4Q8CA71 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm22018-201ENSMUST00000104357 131 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm25261-201ENSMUST00000157416 134 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm27514-201ENSMUST00000183692 110 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm43818-201ENSMUST00000200605 466 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms