Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm12502-201ENSMUST00000120197 444 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm14277-201ENSMUST00000121195 360 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm13570-201ENSMUST00000140763 309 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Mir6979-201ENSMUST00000183927 56 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm44967-201ENSMUST00000207047 631 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gm19208-201ENSMUST00000213861 912 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Morn2-202ENSMUST00000227729 656 ntBASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a6Q8C6K9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm11978-201ENSMUST00000122315 466 ntBASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm38317-201ENSMUST00000195564 343 ntBASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm44069-201ENSMUST00000204898 506 ntBASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a6Q8C6K9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms