Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm2495-201ENSMUST00000191160 466 ntBASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trub1Q8C0D0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Gm18018-201ENSMUST00000198273 408 ntBASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Itm2b-204ENSMUST00000228637 783 ntBASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trub1Q8C0D0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trub1Q8C0D0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trub1Q8C0D0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trub1Q8C0D0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms