Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsfm13Q8BXS2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm14719-201ENSMUST00000121891 340 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm9797-201ENSMUST00000052902 613 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsfm13Q8BXS2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm14057-201ENSMUST00000120631 482 ntBASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm21854-201ENSMUST00000179901 471 ntBASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm20949-201ENSMUST00000206478 952 ntBASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsfm13Q8BXS2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms