Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp40Q8BWR4 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Gm15236-201ENSMUST00000117309 379 ntBASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp40Q8BWR4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm17376-201ENSMUST00000166016 84 ntBASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Gm9061-201ENSMUST00000182707 1006 ntBASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp40Q8BWR4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Gm15808-201ENSMUST00000119046 604 ntBASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Gm11964-201ENSMUST00000120982 444 ntBASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp40Q8BWR4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp40Q8BWR4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp40Q8BWR4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp40Q8BWR4 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.04■□□□□ 0.48
Usp40Q8BWR4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp40Q8BWR4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms