Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm19163-201ENSMUST00000223313 780 ntBASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.03□□□□□ -0.16
Rd3Q8BRE0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rd3Q8BRE0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Gm11591-201ENSMUST00000120063 702 ntBASIC14.02□□□□□ -0.17
Rd3Q8BRE0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Gm37489-201ENSMUST00000191883 159 ntBASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rd3Q8BRE0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm7809-201ENSMUST00000153199 742 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm2991-201ENSMUST00000173338 480 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm18056-201ENSMUST00000207670 568 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm18061-201ENSMUST00000208350 562 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm18063-201ENSMUST00000208529 568 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm18052-201ENSMUST00000208750 559 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rd3Q8BRE0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14□□□□□ -0.17
Rd3Q8BRE0 Gm15897-201ENSMUST00000117770 1486 ntBASIC14□□□□□ -0.17
Rd3Q8BRE0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms