Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpsf4Q8BQZ5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm15376-201ENSMUST00000122258 783 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm24420-201ENSMUST00000176676 59 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm8515-201ENSMUST00000194852 576 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cpsf4Q8BQZ5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Gm45384-201ENSMUST00000210451 277 ntBASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4Q8BQZ5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms