Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gm17971-201ENSMUST00000190239 806 ntBASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gm2651-201ENSMUST00000203560 838 ntBASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smco3Q8BQM7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Smco3Q8BQM7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Smco3Q8BQM7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Smco3Q8BQM7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Gm15427-201ENSMUST00000117288 531 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 BC001981-202ENSMUST00000191393 1545 ntBASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smco3Q8BQM7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms