Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm17040-202ENSMUST00000170597 889 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm23363-201ENSMUST00000175024 79 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm37201-201ENSMUST00000191845 523 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trnp1Q80ZI1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm13611-201ENSMUST00000118269 318 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm9211-201ENSMUST00000182882 975 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm7003-201ENSMUST00000195089 312 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Rprl1-202ENSMUST00000198476 238 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trnp1Q80ZI1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm12266-201ENSMUST00000120311 962 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm24749-201ENSMUST00000157838 343 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trnp1Q80ZI1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms