Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm8738-201ENSMUST00000172606 329 ntBASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Mir7070-201ENSMUST00000183657 86 ntBASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm32025-201ENSMUST00000217960 307 ntBASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp6nlQ80XC3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Usp6nlQ80XC3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm12997-201ENSMUST00000120207 640 ntBASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm2383-201ENSMUST00000181461 807 ntBASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Usp6nlQ80XC3 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.57□□□□□ -0.08
Usp6nlQ80XC3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms