Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13□□□□□ -0.33
Pcdh19Q80TF3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13□□□□□ -0.33
Pcdh19Q80TF3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13□□□□□ -0.33
Pcdh19Q80TF3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh19Q80TF3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms