Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn4bQ7M729 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Mir7221-201ENSMUST00000184009 72 ntBASIC12.91□□□□□ -0.34
Scn4bQ7M729 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Mir6392-201ENSMUST00000184924 108 ntBASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm26315-201ENSMUST00000083890 321 ntBASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn4bQ7M729 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.9□□□□□ -0.34
Scn4bQ7M729 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.9□□□□□ -0.34
Scn4bQ7M729 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.9□□□□□ -0.34
Scn4bQ7M729 Gm18624-201ENSMUST00000220966 658 ntBASIC12.9□□□□□ -0.34
Scn4bQ7M729 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn4bQ7M729 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.9□□□□□ -0.35
Scn4bQ7M729 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn4bQ7M729 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
Scn4bQ7M729 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms