Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Gm43947-201ENSMUST00000203019 959 ntBASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx55Q6ZPL9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Gm26361-201ENSMUST00000158868 186 ntBASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Gm42997-202ENSMUST00000200321 985 ntBASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Gm22058-201ENSMUST00000083393 310 ntBASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx55Q6ZPL9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm13492-201ENSMUST00000119772 665 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm24514-201ENSMUST00000174961 285 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm3096-201ENSMUST00000185770 364 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm8712-201ENSMUST00000221090 701 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx55Q6ZPL9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx55Q6ZPL9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms