Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rad54bQ6PFE3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rad54bQ6PFE3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rad54bQ6PFE3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rad54bQ6PFE3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rad54bQ6PFE3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rad54bQ6PFE3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rad54bQ6PFE3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms