Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.12□□□□□ -0.47
VcanQ62059 Gm12990-201ENSMUST00000120372 468 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
VcanQ62059 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.12□□□□□ -0.47
VcanQ62059 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Ginm1-202ENSMUST00000065124 300 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.12□□□□□ -0.47
VcanQ62059 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.12□□□□□ -0.47
VcanQ62059 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VcanQ62059 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.12□□□□□ -0.47
VcanQ62059 Gm11451-201ENSMUST00000118946 630 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.12□□□□□ -0.47
VcanQ62059 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.12□□□□□ -0.47
VcanQ62059 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.12□□□□□ -0.47
VcanQ62059 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.12□□□□□ -0.47
VcanQ62059 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
VcanQ62059 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Gm12502-201ENSMUST00000120197 444 ntBASIC12.11□□□□□ -0.47
VcanQ62059 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.11□□□□□ -0.47
VcanQ62059 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.11□□□□□ -0.47
VcanQ62059 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.11□□□□□ -0.47
VcanQ62059 Gm45856-201ENSMUST00000212752 416 ntBASIC12.11□□□□□ -0.47
VcanQ62059 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.11□□□□□ -0.47
VcanQ62059 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VcanQ62059 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Gm14034-201ENSMUST00000120147 551 ntBASIC12.11□□□□□ -0.47
VcanQ62059 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.11□□□□□ -0.47
VcanQ62059 Gm9132-201ENSMUST00000210182 832 ntBASIC12.11□□□□□ -0.47
VcanQ62059 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VcanQ62059 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VcanQ62059 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Grk6-205ENSMUST00000224653 2976 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VcanQ62059 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.1□□□□□ -0.47
VcanQ62059 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.1□□□□□ -0.47
VcanQ62059 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.1□□□□□ -0.47
VcanQ62059 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
VcanQ62059 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms