Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cln3Q61124 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.46□□□□□ -0.1
Cln3Q61124 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cln3Q61124 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm24990-201ENSMUST00000157406 323 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cln3Q61124 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.45□□□□□ -0.1
Cln3Q61124 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.45□□□□□ -0.1
Cln3Q61124 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.45□□□□□ -0.1
Cln3Q61124 Rps4l-202ENSMUST00000204242 789 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Gm44967-201ENSMUST00000207047 631 ntBASIC14.45□□□□□ -0.1
Cln3Q61124 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.45□□□□□ -0.1
Cln3Q61124 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.45□□□□□ -0.1
Cln3Q61124 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cln3Q61124 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cln3Q61124 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cln3Q61124 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.44□□□□□ -0.1
Cln3Q61124 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.44□□□□□ -0.1
Cln3Q61124 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cln3Q61124 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.44□□□□□ -0.1
Cln3Q61124 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.44□□□□□ -0.1
Cln3Q61124 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.44□□□□□ -0.1
Cln3Q61124 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cln3Q61124 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cln3Q61124 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.44□□□□□ -0.1
Cln3Q61124 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cln3Q61124 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.43□□□□□ -0.1
Cln3Q61124 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Gm38092-201ENSMUST00000195600 653 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Gm42660-201ENSMUST00000197733 947 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms