Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm27530-201ENSMUST00000184096 98 ntBASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.75□□□□□ -0.37
Col12a1Q60847 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gm3619-201ENSMUST00000219947 775 ntBASIC12.74□□□□□ -0.37
Col12a1Q60847 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.74□□□□□ -0.37
Col12a1Q60847 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.74□□□□□ -0.37
Col12a1Q60847 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.74□□□□□ -0.37
Col12a1Q60847 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.74□□□□□ -0.37
Col12a1Q60847 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col12a1Q60847 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.74□□□□□ -0.37
Col12a1Q60847 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.74□□□□□ -0.37
Col12a1Q60847 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm11451-201ENSMUST00000118946 630 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm15573-201ENSMUST00000119487 540 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm10774-201ENSMUST00000188689 204 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm14644-201ENSMUST00000116671 647 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm4482-201ENSMUST00000200876 742 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm9111-201ENSMUST00000219394 709 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.73□□□□□ -0.37
Col12a1Q60847 Gm5733-201ENSMUST00000190232 939 ntBASIC12.73□□□□□ -0.37
Col12a1Q60847 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col12a1Q60847 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm45120-201ENSMUST00000208880 408 ntBASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm9132-201ENSMUST00000210182 832 ntBASIC12.72□□□□□ -0.37
Col12a1Q60847 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms