Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm24543-201ENSMUST00000103867 82 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm5566-201ENSMUST00000116118 459 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm11424-201ENSMUST00000121929 829 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm5866-201ENSMUST00000177881 973 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm27989-201ENSMUST00000184721 107 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 AA619741-201ENSMUST00000195095 646 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxd4Q60688 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.87□□□□□ -0.19
Foxd4Q60688 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxd4Q60688 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Foxd4Q60688 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Gm28455-201ENSMUST00000189105 1290 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Gm37576-201ENSMUST00000194228 372 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Gm43438-201ENSMUST00000198133 379 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Gm18027-201ENSMUST00000218947 619 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Shd-206ENSMUST00000225145 998 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Foxd4Q60688 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.86□□□□□ -0.19
Foxd4Q60688 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxd4Q60688 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxd4Q60688 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxd4Q60688 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms