Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Mir449b-201ENSMUST00000104833 80 ntBASIC12.65□□□□□ -0.38
Nr1h4Q60641 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nr1h4Q60641 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Nr1h4Q60641 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nr1h4Q60641 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nr1h4Q60641 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.64□□□□□ -0.39
Nr1h4Q60641 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.64□□□□□ -0.39
Nr1h4Q60641 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm3436-201ENSMUST00000179930 840 ntBASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm44771-201ENSMUST00000206975 626 ntBASIC12.64□□□□□ -0.39
Nr1h4Q60641 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms