Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Mir7023-201ENSMUST00000185093 64 ntBASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Gm37714-201ENSMUST00000194742 342 ntBASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Gm44683-201ENSMUST00000209088 484 ntBASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tsr1Q5SWD9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Mir698-201ENSMUST00000102164 109 ntBASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm5656-201ENSMUST00000171020 1096 ntBASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tsr1Q5SWD9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Mir874-201ENSMUST00000104769 76 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm15171-201ENSMUST00000122191 334 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm44251-201ENSMUST00000204963 442 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm43980-201ENSMUST00000204899 1612 ntBASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tsr1Q5SWD9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms