Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm28388-201ENSMUST00000186262 437 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm3619-201ENSMUST00000219947 775 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm11980-201ENSMUST00000121445 986 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Gm38092-201ENSMUST00000195600 653 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Ginm1-202ENSMUST00000065124 300 ntBASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps13aQ5H8C4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm43520-201ENSMUST00000197996 164 ntBASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps13aQ5H8C4 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps13aQ5H8C4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps13aQ5H8C4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps13aQ5H8C4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps13aQ5H8C4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps13aQ5H8C4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms