Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Gm45930-201ENSMUST00000221330 292 ntBASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rc3h1Q4VGL6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Gm43118-201ENSMUST00000199149 775 ntBASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rc3h1Q4VGL6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Gm11591-201ENSMUST00000120063 702 ntBASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.27■□□□□ 0.04
Rc3h1Q4VGL6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms