Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm11478-201ENSMUST00000117851 599 ntBASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm24196-201ENSMUST00000179161 110 ntBASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm8213-201ENSMUST00000118191 441 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm5745-201ENSMUST00000183748 313 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm27839-201ENSMUST00000184242 106 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm19931-201ENSMUST00000198920 368 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm17794-201ENSMUST00000220252 955 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nhlrc4Q3UP44 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Gm11814-201ENSMUST00000119515 929 ntBASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nhlrc4Q3UP44 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nhlrc4Q3UP44 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nhlrc4Q3UP44 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nhlrc4Q3UP44 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.15□□□□□ -0.47
Nhlrc4Q3UP44 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.14□□□□□ -0.47
Nhlrc4Q3UP44 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms