Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Q3U1D9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.51□□□□□ -0.57
Q3U1D9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Q3U1D9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Q3U1D9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Q3U1D9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Q3U1D9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Acot6-202ENSMUST00000222921 3622 ntBASIC11.5□□□□□ -0.57
Q3U1D9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Gm19184-201ENSMUST00000196798 928 ntBASIC11.5□□□□□ -0.57
Q3U1D9 Gm45880-201ENSMUST00000213041 853 ntBASIC11.5□□□□□ -0.57
Q3U1D9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.5□□□□□ -0.57
Q3U1D9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Q3U1D9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Q3U1D9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Q3U1D9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Mir686-201ENSMUST00000102174 109 ntBASIC11.49□□□□□ -0.57
Q3U1D9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Q3U1D9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.49□□□□□ -0.57
Q3U1D9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.49□□□□□ -0.57
Q3U1D9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Q3U1D9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.49□□□□□ -0.57
Q3U1D9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.49□□□□□ -0.57
Q3U1D9 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.49□□□□□ -0.57
Q3U1D9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.49□□□□□ -0.57
Q3U1D9 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.49□□□□□ -0.57
Q3U1D9 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.49□□□□□ -0.57
Q3U1D9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Q3U1D9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Q3U1D9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.49□□□□□ -0.57
Q3U1D9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Q3U1D9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms