Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Gm3436-201ENSMUST00000179930 840 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm44771-201ENSMUST00000206975 626 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm45841-201ENSMUST00000207700 164 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Apoa1Q00623 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm15240-201ENSMUST00000118156 720 ntBASIC12.54□□□□□ -0.4
Apoa1Q00623 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Gm27772-201ENSMUST00000184900 187 ntBASIC12.54□□□□□ -0.4
Apoa1Q00623 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Apoa1Q00623 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Apoa1Q00623 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.53□□□□□ -0.4
Apoa1Q00623 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.53□□□□□ -0.4
Apoa1Q00623 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Apoa1Q00623 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Apoa1Q00623 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.53□□□□□ -0.4
Apoa1Q00623 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Apoa1Q00623 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Apoa1Q00623 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms