Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim43cP86449 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.42□□□□□ -0.1
Trim43cP86449 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.41□□□□□ -0.1
Trim43cP86449 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Trim43cP86449 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim43cP86449 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim43cP86449 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Gm9794-201ENSMUST00000202370 423 ntBASIC14.41□□□□□ -0.1
Trim43cP86449 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43cP86449 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43cP86449 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim43cP86449 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim43cP86449 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Gm44069-201ENSMUST00000204898 506 ntBASIC14.4□□□□□ -0.1
Trim43cP86449 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.4□□□□□ -0.1
Trim43cP86449 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.4□□□□□ -0.1
Trim43cP86449 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim43cP86449 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim43cP86449 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trim43cP86449 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim43cP86449 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Trim43cP86449 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim43cP86449 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43cP86449 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trim43cP86449 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43cP86449 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim43cP86449 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim43cP86449 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.39□□□□□ -0.11
Trim43cP86449 Gm10156-201ENSMUST00000122364 462 ntBASIC14.39□□□□□ -0.11
Trim43cP86449 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim43cP86449 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim43cP86449 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.39□□□□□ -0.11
Trim43cP86449 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim43cP86449 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.39□□□□□ -0.11
Trim43cP86449 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trim43cP86449 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43cP86449 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43cP86449 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms