Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SgcaP82350 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.11□□□□□ -0.63
SgcaP82350 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SgcaP82350 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.1□□□□□ -0.63
SgcaP82350 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Mir698-201ENSMUST00000102164 109 ntBASIC11.1□□□□□ -0.63
SgcaP82350 Mir874-201ENSMUST00000104769 76 ntBASIC11.1□□□□□ -0.63
SgcaP82350 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.1□□□□□ -0.63
SgcaP82350 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SgcaP82350 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SgcaP82350 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcaP82350 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.09□□□□□ -0.63
SgcaP82350 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.09□□□□□ -0.63
SgcaP82350 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.09□□□□□ -0.63
SgcaP82350 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.09□□□□□ -0.63
SgcaP82350 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.09□□□□□ -0.63
SgcaP82350 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Gm27741-201ENSMUST00000185060 237 ntBASIC11.09□□□□□ -0.63
SgcaP82350 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.09□□□□□ -0.63
SgcaP82350 Gm38225-201ENSMUST00000194001 393 ntBASIC11.09□□□□□ -0.63
SgcaP82350 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.09□□□□□ -0.63
SgcaP82350 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.09□□□□□ -0.63
SgcaP82350 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcaP82350 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcaP82350 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SgcaP82350 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms