Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.07□□□□□ -0.32
Shox2P70390 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.07□□□□□ -0.32
Shox2P70390 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.07□□□□□ -0.32
Shox2P70390 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.07□□□□□ -0.32
Shox2P70390 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.07□□□□□ -0.32
Shox2P70390 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.07□□□□□ -0.32
Shox2P70390 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Shox2P70390 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.06□□□□□ -0.32
Shox2P70390 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.06□□□□□ -0.32
Shox2P70390 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shox2P70390 Gm7063-201ENSMUST00000186840 981 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.06□□□□□ -0.32
Shox2P70390 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.06□□□□□ -0.32
Shox2P70390 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Shox2P70390 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shox2P70390 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shox2P70390 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Gm15427-201ENSMUST00000117288 531 ntBASIC13.05□□□□□ -0.32
Shox2P70390 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.05□□□□□ -0.32
Shox2P70390 Mir5126-201ENSMUST00000175513 77 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms