Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Msx3P70354 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Msx3P70354 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msx3P70354 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Msx3P70354 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Msx3P70354 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Gm12341-201ENSMUST00000119724 503 ntBASIC13.62□□□□□ -0.23
Msx3P70354 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.62□□□□□ -0.23
Msx3P70354 Gm18307-201ENSMUST00000206864 949 ntBASIC13.62□□□□□ -0.23
Msx3P70354 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.62□□□□□ -0.23
Msx3P70354 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.62□□□□□ -0.23
Msx3P70354 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.62□□□□□ -0.23
Msx3P70354 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Msx3P70354 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.62□□□□□ -0.23
Msx3P70354 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msx3P70354 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msx3P70354 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Msx3P70354 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Msx3P70354 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.61□□□□□ -0.23
Msx3P70354 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.61□□□□□ -0.23
Msx3P70354 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.61□□□□□ -0.23
Msx3P70354 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Msx3P70354 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msx3P70354 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms