Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm6P62313 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lsm6P62313 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm6P62313 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm6P62313 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.65□□□□□ -0.55
Lsm6P62313 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.65□□□□□ -0.55
Lsm6P62313 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm6P62313 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lsm6P62313 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm6P62313 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.64□□□□□ -0.55
Lsm6P62313 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.64□□□□□ -0.55
Lsm6P62313 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm12859-201ENSMUST00000117834 427 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.64□□□□□ -0.55
Lsm6P62313 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm44397-201ENSMUST00000195950 113 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Gm19931-201ENSMUST00000198920 368 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Gm6983-201ENSMUST00000214912 628 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Gm18624-201ENSMUST00000220966 658 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.64□□□□□ -0.55
Lsm6P62313 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.64□□□□□ -0.55
Lsm6P62313 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm6P62313 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm6P62313 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.63□□□□□ -0.55
Lsm6P62313 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Lsm6P62313 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm6P62313 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gm13689-201ENSMUST00000119360 685 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.63□□□□□ -0.55
Lsm6P62313 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Mir6392-201ENSMUST00000184924 108 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm6P62313 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.63□□□□□ -0.55
Lsm6P62313 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gm15823-201ENSMUST00000064305 670 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.63□□□□□ -0.55
Lsm6P62313 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm6P62313 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms