Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm3P62311 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm3P62311 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm3P62311 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm3P62311 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm43347-201ENSMUST00000200226 580 ntBASIC12.03□□□□□ -0.48
Lsm3P62311 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.03□□□□□ -0.48
Lsm3P62311 Gm6443-201ENSMUST00000203599 874 ntBASIC12.03□□□□□ -0.48
Lsm3P62311 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm3P62311 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm3P62311 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm3P62311 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.03□□□□□ -0.48
Lsm3P62311 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm3P62311 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm3P62311 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm3P62311 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.02□□□□□ -0.48
Lsm3P62311 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.02□□□□□ -0.48
Lsm3P62311 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lsm3P62311 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lsm3P62311 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lsm3P62311 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm3P62311 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm3P62311 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms