Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.7□□□□□ -0.54
Sec61a1P61620 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm15957-201ENSMUST00000118893 974 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm24694-201ENSMUST00000180054 110 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm9522-201ENSMUST00000182394 926 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm27663-201ENSMUST00000184839 110 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm6218-201ENSMUST00000219812 628 ntBASIC11.69□□□□□ -0.54
Sec61a1P61620 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sec61a1P61620 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61a1P61620 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61a1P61620 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.68□□□□□ -0.54
Sec61a1P61620 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm33320-201ENSMUST00000192232 530 ntBASIC11.68□□□□□ -0.54
Sec61a1P61620 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.68□□□□□ -0.54
Sec61a1P61620 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm44719-201ENSMUST00000206404 149 ntBASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm20445-201ENSMUST00000061905 565 ntBASIC11.68□□□□□ -0.54
Sec61a1P61620 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sec61a1P61620 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61a1P61620 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a1P61620 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a1P61620 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms