Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.77□□□□□ -0.52
Sf3b6P59708 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sf3b6P59708 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.77□□□□□ -0.53
Sf3b6P59708 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.77□□□□□ -0.53
Sf3b6P59708 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.77□□□□□ -0.53
Sf3b6P59708 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.77□□□□□ -0.53
Sf3b6P59708 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.77□□□□□ -0.53
Sf3b6P59708 Matn2-203ENSMUST00000226766 3252 ntBASIC11.77□□□□□ -0.53
Sf3b6P59708 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.77□□□□□ -0.53
Sf3b6P59708 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sf3b6P59708 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.76□□□□□ -0.53
Sf3b6P59708 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.76□□□□□ -0.53
Sf3b6P59708 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm6415-201ENSMUST00000118488 348 ntBASIC11.76□□□□□ -0.53
Sf3b6P59708 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Gm24420-201ENSMUST00000176676 59 ntBASIC11.76□□□□□ -0.53
Sf3b6P59708 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3b6P59708 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sf3b6P59708 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms