Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Rubie-203ENSMUST00000227803 2430 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.71□□□□□ -0.69
Sssca1P56873 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Sssca1P56873 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.71□□□□□ -0.69
Sssca1P56873 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Sssca1P56873 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Sssca1P56873 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sssca1P56873 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.71□□□□□ -0.69
Sssca1P56873 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sssca1P56873 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Sssca1P56873 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sssca1P56873 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Sssca1P56873 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.71□□□□□ -0.69
Sssca1P56873 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sssca1P56873 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sssca1P56873 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.71□□□□□ -0.7
Sssca1P56873 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sssca1P56873 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Sssca1P56873 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sssca1P56873 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sssca1P56873 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sssca1P56873 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.7□□□□□ -0.7
Sssca1P56873 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gm4995-201ENSMUST00000117247 432 ntBASIC10.7□□□□□ -0.7
Sssca1P56873 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.7□□□□□ -0.7
Sssca1P56873 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.7□□□□□ -0.7
Sssca1P56873 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Gm27533-201ENSMUST00000183800 152 ntBASIC10.7□□□□□ -0.7
Sssca1P56873 Gm27525-201ENSMUST00000184465 107 ntBASIC10.7□□□□□ -0.7
Sssca1P56873 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.7□□□□□ -0.7
Sssca1P56873 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.7□□□□□ -0.7
Sssca1P56873 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sssca1P56873 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms