Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Msh6P54276 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.66■□□□□ 0.26
Msh6P54276 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.65■□□□□ 0.26
Msh6P54276 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Msh6P54276 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh6P54276 Gm22121-201ENSMUST00000175148 54 ntBASIC16.65■□□□□ 0.26
Msh6P54276 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh6P54276 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.65■□□□□ 0.26
Msh6P54276 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.65■□□□□ 0.26
Msh6P54276 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh6P54276 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.65■□□□□ 0.26
Msh6P54276 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Msh6P54276 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.65■□□□□ 0.26
Msh6P54276 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.65■□□□□ 0.26
Msh6P54276 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.65■□□□□ 0.26
Msh6P54276 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.65■□□□□ 0.26
Msh6P54276 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh6P54276 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Msh6P54276 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh6P54276 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh6P54276 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh6P54276 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh6P54276 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh6P54276 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.64■□□□□ 0.26
Msh6P54276 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
Msh6P54276 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Msh6P54276 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Msh6P54276 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh6P54276 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.64■□□□□ 0.25
Msh6P54276 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Msh6P54276 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Gm11439-201ENSMUST00000118598 409 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Gm4909-201ENSMUST00000118749 794 ntBASIC16.64■□□□□ 0.25
Msh6P54276 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.64■□□□□ 0.25
Msh6P54276 Gm27341-201ENSMUST00000183570 106 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Gm2260-201ENSMUST00000184965 657 ntBASIC16.64■□□□□ 0.25
Msh6P54276 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.64■□□□□ 0.25
Msh6P54276 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.64■□□□□ 0.25
Msh6P54276 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.64■□□□□ 0.25
Msh6P54276 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh6P54276 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.63■□□□□ 0.25
Msh6P54276 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh6P54276 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms