Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Gm13342-201ENSMUST00000121055 207 ntBASIC12.72□□□□□ -0.37
Sox3P53784 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Gm26083-201ENSMUST00000157904 193 ntBASIC12.72□□□□□ -0.37
Sox3P53784 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sox3P53784 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox3P53784 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.72□□□□□ -0.37
Sox3P53784 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox3P53784 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.72□□□□□ -0.37
Sox3P53784 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.72□□□□□ -0.37
Sox3P53784 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox3P53784 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox3P53784 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox3P53784 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox3P53784 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox3P53784 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
Sox3P53784 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sox3P53784 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sox3P53784 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Sox3P53784 Gm11524-201ENSMUST00000119349 807 ntBASIC12.71□□□□□ -0.37
Sox3P53784 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.71□□□□□ -0.37
Sox3P53784 Gm12176-201ENSMUST00000121420 875 ntBASIC12.71□□□□□ -0.37
Sox3P53784 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.71□□□□□ -0.37
Sox3P53784 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox3P53784 Gm43094-201ENSMUST00000196549 921 ntBASIC12.71□□□□□ -0.37
Sox3P53784 Gm44364-201ENSMUST00000198368 141 ntBASIC12.71□□□□□ -0.37
Sox3P53784 Gm43118-201ENSMUST00000199149 775 ntBASIC12.71□□□□□ -0.37
Sox3P53784 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox3P53784 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Sox3P53784 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sox3P53784 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sox3P53784 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sox3P53784 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.71□□□□□ -0.38
Sox3P53784 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.71□□□□□ -0.38
Sox3P53784 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox3P53784 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Sox3P53784 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Sox3P53784 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms