Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28324-201ENSMUST00000187913 264 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Gm37666-201ENSMUST00000194110 866 ntBASIC13.48□□□□□ -0.25
Sox1P53783 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox1P53783 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sox1P53783 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Gm12165-201ENSMUST00000117047 342 ntBASIC13.47□□□□□ -0.25
Sox1P53783 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.47□□□□□ -0.25
Sox1P53783 Gm20392-201ENSMUST00000173047 701 ntBASIC13.47□□□□□ -0.25
Sox1P53783 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox1P53783 Gm43916-201ENSMUST00000205062 967 ntBASIC13.47□□□□□ -0.25
Sox1P53783 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox1P53783 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.47□□□□□ -0.25
Sox1P53783 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.47□□□□□ -0.25
Sox1P53783 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.47□□□□□ -0.25
Sox1P53783 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox1P53783 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox1P53783 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Efs-202ENSMUST00000227037 2540 ntBASIC13.46□□□□□ -0.25
Sox1P53783 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sox1P53783 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sox1P53783 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox1P53783 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox1P53783 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Sox1P53783 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox1P53783 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox1P53783 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Gzmn-202ENSMUST00000225535 989 ntBASIC13.46□□□□□ -0.25
Sox1P53783 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.46□□□□□ -0.25
Sox1P53783 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox1P53783 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox1P53783 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox1P53783 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Sox1P53783 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Sox1P53783 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox1P53783 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sox1P53783 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sox1P53783 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox1P53783 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sox1P53783 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.45□□□□□ -0.26
Sox1P53783 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms