Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm2673-201ENSMUST00000120958 1608 ntBASIC20.03■□□□□ 0.8
Cux1P53564 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Cux1P53564 Gm14921-201ENSMUST00000118643 908 ntBASIC20.03■□□□□ 0.8
Cux1P53564 Gm16481-201ENSMUST00000119074 1227 ntBASIC20.03■□□□□ 0.8
Cux1P53564 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cux1P53564 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.03■□□□□ 0.8
Cux1P53564 CT025694.1-201ENSMUST00000226188 934 ntBASIC20.03■□□□□ 0.8
Cux1P53564 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Ap5m1-205ENSMUST00000227431 3757 ntBASIC20.03■□□□□ 0.8
Cux1P53564 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cux1P53564 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC20.03■□□□□ 0.8
Cux1P53564 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Gm6963-201ENSMUST00000147879 379 ntBASIC20.02■□□□□ 0.8
Cux1P53564 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC20.02■□□□□ 0.8
Cux1P53564 Gm27023-201ENSMUST00000182372 285 ntBASIC20.02■□□□□ 0.8
Cux1P53564 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC20.02■□□□□ 0.8
Cux1P53564 Gm9555-201ENSMUST00000200908 583 ntBASIC20.02■□□□□ 0.8
Cux1P53564 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.02■□□□□ 0.8
Cux1P53564 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.02■□□□□ 0.8
Cux1P53564 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC20.02■□□□□ 0.8
Cux1P53564 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Cux1P53564 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC20.02■□□□□ 0.8
Cux1P53564 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cux1P53564 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cux1P53564 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cux1P53564 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
Cux1P53564 Gm5523-201ENSMUST00000180415 997 ntBASIC20.02■□□□□ 0.79
Cux1P53564 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cux1P53564 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cux1P53564 Gm8959-201ENSMUST00000213150 571 ntBASIC20.02■□□□□ 0.79
Cux1P53564 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cux1P53564 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cux1P53564 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC20.01■□□□□ 0.79
Cux1P53564 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cux1P53564 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cux1P53564 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cux1P53564 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cux1P53564 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cux1P53564 Gm14999-201ENSMUST00000121039 624 ntBASIC20.01■□□□□ 0.79
Cux1P53564 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC20.01■□□□□ 0.79
Cux1P53564 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC20.01■□□□□ 0.79
Cux1P53564 Gm19994-201ENSMUST00000217086 586 ntBASIC20.01■□□□□ 0.79
Cux1P53564 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC20.01■□□□□ 0.79
Cux1P53564 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Gm8798-201ENSMUST00000211877 1661 ntBASIC20■□□□□ 0.79
Cux1P53564 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC20■□□□□ 0.79
Cux1P53564 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20■□□□□ 0.79
Cux1P53564 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cux1P53564 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 n-R5s14-201ENSMUST00000122688 107 ntBASIC20■□□□□ 0.79
Cux1P53564 Gm27552-201ENSMUST00000183351 62 ntBASIC20■□□□□ 0.79
Cux1P53564 Gm27844-201ENSMUST00000183613 62 ntBASIC20■□□□□ 0.79
Cux1P53564 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20■□□□□ 0.79
Cux1P53564 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cux1P53564 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cux1P53564 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cux1P53564 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms