Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Pdx1P52946 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.1□□□□□ -0.31
Pdx1P52946 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pdx1P52946 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Gm13612-201ENSMUST00000119276 390 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Gm6244-201ENSMUST00000178732 841 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 Mir7221-201ENSMUST00000184009 72 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 Gm38671-201ENSMUST00000200573 130 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Gm8598-201ENSMUST00000221184 836 ntBASIC13.1□□□□□ -0.31
Pdx1P52946 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pdx1P52946 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdx1P52946 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pdx1P52946 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.09□□□□□ -0.31
Pdx1P52946 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.09□□□□□ -0.31
Pdx1P52946 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.09□□□□□ -0.31
Pdx1P52946 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.09□□□□□ -0.31
Pdx1P52946 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pdx1P52946 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pdx1P52946 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pdx1P52946 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.09□□□□□ -0.31
Pdx1P52946 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.09□□□□□ -0.31
Pdx1P52946 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Pdx1P52946 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pdx1P52946 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pdx1P52946 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Gm15806-201ENSMUST00000120696 955 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.08□□□□□ -0.32
Pdx1P52946 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Gm27892-201ENSMUST00000185017 106 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms